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Comparison of mathematical models for lactation curves analysis in Criollo Limonero crossbred cattle

A Rodríguez-Petit, A Parra Oliveros1, A Arteaga Tapias2 and J Vergara-López3

Politécnico de la Costa Atlántica. Carrera 38 No 79A - 167. Barranquilla, Colombia
arodriguezpt@pca.edu.co
1 Instituto Nacional de Investigaciones Agrícolas, Venezuela
2 Universidad Nacional Experimental Sur del Lago, Venezuela
3 Universidad del Zulia, Venezuela

Abstract

The present investigation was carried out to analyze, compare and select the mathematical model of the lactation curve with a better adjustment for crossbred Criollo Limonero dairy cows. A total of 206 complete lactations (≥270 days) were evaluated, for a total of 12,845 daily milk production data from a herd of crossbreds cows Criollo Limonero x White Brahman and Criollo Limonero x Swiss Brown, under tropical dry forest conditions and grazing based feeding. Three empirical mathematical models were used to fit daily milk yield: Wood incomplete gamma function (WOOD), Logarithmic Quadratic (LOGQUAD) and multiple regression model of Ali and Shaeffer (ALI). The goodness of fit of the models were estimated through adjusted multiple coefficient of determination (R2Adj ), residual standard deviation (RSD) and the correlation between the real yield and the estimated milk yield (r). Average daily milk yield (5.41 kg/day), total lactation yield (1437 kg) and lactation length (262.94 days) were described; expected peak yield (6.50 kg/day), expected peak day (56th) and lactation persistence (93.23%) were estimated through mathematical expressions derived from the components of WOOD equation. ALI showed the highest values for R2Adj (0.974) and r (0.987), as well as the lower RSD (0.036), so it was selected as the best fit model to estimate the actual milk yield of Criollo Limonero crossbred cows.

Key words: daily yield, lactation persistence, peak day, peak yield


Introduction

The cattle known as Tropical Criollo is a type of Bos taurus cattle whose genetic base comes from the biotypes and breeds introduced in America in the 15th century (Rosendo-Ponce and Becerril-Pérez 2015). Many of these cattle types are an important part of grazing based milk production systems, as is the case of the Central American Criollos, Hartón del Valle de Colombia, Criollo Lageanos of Brazil, Carora and Criollo Limonero of Venezuela (Tewolde 1997).

High temperatures, solar radiation and relative humidity, as well as a marked seasonality of rain generally characterize the environmental conditions in which these animals have evolved. These situations determine a variable supply of low digestibility forages, with high concentrations of fiber and low protein and energy contents. These extreme conditions have determined a resistance to the tropical environment, that according to Tewolde (1997), confer to the Criollos outstanding characteristics with respect to other genotypes in terms of fertility, apparent resistance to parasites and environmental stress, ease management and carcass quality characteristics (Rodas-González et al 2006; Rodriguez-Voigt et al 1997).

Production in dairy cows increases fast from calving to a peak production that is reached in a relatively short period of time and then begins to decrease gradually until drying. Animal genetics, management and environmental conditions mainly determine the natural dynamics of this process. The milk production throughout lactation can be expressed graphically in a lactation curve and can be described by the coefficients of a mathematical model; where the better adjustment to the actual shape, the greater will be the ability to predict milk production of the cattle breed studied (Batra 1986; Palacios et al 2016).

Lactation curve modeling is an important research tool to develop and validate standards in order to explain the main patterns of milk production associated with the stage of lactation, which is of great importance in the organization of management, feeding, selection and reproductive planning in genetic improvement programs (Silvestre et al 2006).

Contreras and Rincon (1978) report, maybe the first recorded data on Criollo Limonero cattle lactation; however, there is an apparent lack of available information on the shape and modeling of their lactation curve.

The present investigation was carried to analyze, compare and select the mathematical model of the lactation curve with a better adjust to productive behavior of crossbred Criollo Limonero dairy cows.


Materials and methods

Milk production data analyzed are part of the records of Estación Experimental Local El Guayabo of the Instituto Nacional de Investigaciones Agrícolas (INIA) located in the south west of Venezuela. The herd was conformed of crossbred cows Criollo Limonero x White Brahman and Criollo Limonero x Swiss Brown. A total of 206 complete lactations (more than 270 days) were evaluated, for a total of 12,845 daily milk production data. The animals were hand milked twice a day (05:00 and 13:00), without calf and their performance was recorded.

The region is characterized as tropical dry forest with a precipitation of 1803 mm/year distributed seasonally in a bimodal way, average temperature of 27.9 °C and 91% of relative humidity (Vergara-López et al 2006).

The feeding system was based on grazing of mixture pastures of Aleman grass (Echinochloa polystachya) and Tanner grass ( Brachiaria arrecta) managed with 1 day of occupation and 28 to 35 days of rest, depending on the season of the year. The average animal stocking rates was 2.0 AU/ha.

Three mathematical models were compared to describe the shape of the lactation curve of crossbred Criollo Limonero cows:

Wood incomplete gamma function (Wood 1967; WOOD), has been widely used to describe lactation curves in many species of ruminants (Quintero et al 2007). It is mathematically expressed with the following equation:

Where yt represents milk production on day t, the parameter a is related to the initial production, b is the slope of the curve before the maximum production peak and c is the slope of the curve after the production peak (Barrios et al 1996).

Where yt is the volume of production measured on day t of lactation, parameters a, b, and c are the parameters to be estimated from the curve, while d is the parameter that multiplies the natural logarithm of days in milk (t ) (Fernández et al 2004).

Ali and Schaeffer (1987) (ALI), described a multiple regression model to calculate the relative efficiencies of selection to change the shape of the lactation curve (Kettunen et al 2000). It is described with the expression:

Where yt is the milk yield on day t, a is a parameter associated with the peak yield, d and e are parameters associated with increasing slope, while b and c are associated with decreasing slope (Silvestre et al 2006).

The models described above were selected for this study, because they were frequently used in the studies of lactations in Criollo breeds and for achieve good adjustments in tropical regions (Fernández et al 2004; Barbosa et al 2007; Hernández and Ponce, 2008).

The goodness of fit of the models was evaluated according to the following criteria suggested by Cankaya et al (2011).

Adjusted multiple coefficient of determination (R2adj):

Residual standard deviation (RSD):

Where n is the number of observations, p is the number of parameters in the model and R2=1−(RSS/TSS) ( RSS: residual sum of squares, TSS: total sum of squares). The coefficient of determination value (R2) is a classic indicator measuring the proportion of total variation about the mean of yt explained by the lactation curve model. However, this tends to increase as elements are added to the model, which can eventually overestimate the fact that the set of elements chosen in the model is adequate to explain the dependent variable. R2adj adjust and penalize the inclusion of coefficients in the model, which make more homogeneous comparisons between models with different parameters.

As an additional comparison parameter, the correlation between the real yield and the estimated milk yield (r) was determined as a way of quantifying the degree of association between the real and estimated values. The selection criteria used in this analysis was to select the model with the highest R2adj and lowest RSD.

Peak yield (PY), peak day on which the maximum yield is expected (PD), as well as the persistence of lactation (P) were determined by means of mathematical expressions derived from the components of the equation of Wood (Cankaya et al 2011; Quintero et al 2007).

The STATGRAPHICS (Ver. 18.1.09) Nonlinear Regression tool to run the models and determine the best fitting using the Levemberg-Marquardt adjust method was used. The parameters a, b, c, d, and e were estimated by non-linear least squares through the same tool.


Results and discussion

Table 1 shows the general information of the lactations evaluated in this study. The average daily milk production here obtained could be considered low compared to that reported for Criollo Limonero, but relatively higher than reported for other tropical criollos (Rosendo-Ponce and Becerril-Pérez 2015).

Table 1. Summary of the production of the lactations evaluated

Variable

Mean

Variation
coefficient (%)

SEM

Day milk yield (kg/day)

5.41

11.3

0.04

Total lactation yield (kg)

1437

41.3

35.5

Lactation length (days)

262.9

23.6

3.70

Perozo et al (1978), mention a mean of 1850 kg of milk per lactations of 280 days, while Contreras and Rincón (1978), report 1642 kg/milk per lactation, and Zambrano et al (2006) recorded 1964 kg/milk. Observed values for total lactation production in this investigation (1437 kg/milk), were lower than those reported. Probably the inclusion of the Bos indicus component in the crossing, seeking resistance to the environment, is affecting the milk production capacity of crossbred Criollo Limonero.

Another aspect to be consider in this discrepancy is the high variability associated with this type of measurements. Several authors report variabilities that can even exceed 50%, attributable to the effect of variations in diet due to environmental seasonality and to the joint evaluation of several lactations (Ribas and Pérez 1989; Fernández et al 2004; Hernández et al 2005).

The length of lactation observed in this study is related to what has been reported in other studies in Criollo Limonero crossbred cows (Zambrano et al 2006). The lactation duration is an important aspect to consider in this type of livestock that produce under unfavorable climatic conditions, because can compromise the persistence of the reproductive characteristics of cows and conditions of the calves at birth (Rosendo-Ponce and Becerril-Pérez 2015).

The projected value to peak yield was 6.50 kg/milk/day that is expected to be obtained at the 56th (55.7) day after calving and lactation has an estimated persistence of 93.2%. These estimates, in conjunction with the data reported in Table 1, support that Criollo Limonero crossbreds can express acceptable production levels under extreme conditions of feeding, managing and environment (> 5 kg/animal/day), with prolonged lactations whose production has high persistence after reaching the maximum yield (>90%).

The curve described by the average milk production of the lactations evaluated as a whole (Figure 1), presents the classic behavior described for this variable, with an accelerated initial rise after calving followed by a progressive decay until final drying. (Batra 1986). Fast rise to the PY, followed by a low rate of decline in this curve are associated with the estimated high P and correspond to cows with high productive potential, even more under the feeding conditions without supplementation, a situation that is common in most of tropical milk production systems.

Figure 1. Milk production curve in joint evaluated lactations in crossbred Criollo Limonero cows

Table 2 and Figure 2 show the estimated parameters for the models evaluated and their graphic representation, respectively.

Table 2. Estimated parameters for the models evaluated

Models

Parameters (SEM)

a

b

c

d

e

WOOD

3.83 (0.19)

0.18 (0.02)

0.003 (0.00)

LOGQUAD

2.89 (0.31)

-0.028 (0.00)

-0.00003 (0.00)

1.27 (0.12)

ALI

7.11 (2.41)

-3.58 (3.97)

0.73 (1.13)

0.47 (1.34)

-0.25 (0.19)



Figure 2. Actual and empirical estimated lactation curves for crossbred Criollo Limonero cows

The shape of curves shows that the selected models have high adjustments in the explanation of the variability under study, with a high predictive capacity (>R2) (Table 3). These high values of determination have been widely reported in the literature by different authors (Cankaya et al 2011; Macciotta et al 2005; Vargas et al 2000).

Table 3. Goodness of fit parameters for the evaluated models

Models

R2

R2adj

RSD

r

WOOD

0.962

0.961

0.045

0.981

LOGQUAD

0.972

0.972

0.038

0.986

ALI

0.975

0.974

0.036

0.987

R2: determination coefficient; R2 adj: Adjusted coefficient of
determination; RSD: Residual standard deviation; r: Pearson´s
correlation coefficient between real and estimated milk yield

As can be observed, all the models showed a high relation between the predicted and actual values, with highly significant correlation values (r) in the range of 0.981 and 0.987 (Table 3). Likewise, it is possible to appreciate the values of the adjustment parameters (R2, R2adj and RSD), corroborate the power of models to predict the behavior of the lactation curve.

The analysis to residuals between actual and estimated values is shown in Table 4. The standardized bias and kurtosis values describe a fairly symmetric residual distribution. On the other hand, the data observed for the Durbin-Watson statistic confirm the presumption of independence of this, and finally the Anderson-Darling statistic was used to verify the normality of the residuals distribution, which allowed confirming this last assumption. Preference was given to the use of this statistic over other more classic ones such as the Shapiro-Wilk or Kolmogorov-Smirnov-Lilliefors tests to check the normality of the residuals because Anderson-Darling has been described as a more solid test (Pedrosa et al 2015), especially in small sample sizes, which adjusts to the characteristics of this investigation.

Table 4. Residuals analysis for the evaluated models

Models

Standardized
biasa

Standardized
kurtosisa

Anderson-
Darling (A2)b

Durbin-
Watsonc

WOOD

0.78

-0.44

0.33

2.16

QUADLOG

0.41

-0.71

0.22

2.14

ALI

0.71

-0.15

0.36

2.06

a. Values within -2 and 2 express no significant deviation to normal distribution.
b. Empirical critical value (CV) to reject Ho to the normal distribution= 0.75 (1-
α = 0.950). Value for A2 less than CV shows the goodness of fit for normal distribution (p> 0.05).
c. Values ​​close to 2 show uncorrelated residuals

The extreme similarity of the estimated empirical curves can be confirmed with the graphical analysis of the residuals (Figure 3). However, it can be seen how the differences between the models tend to be concentrated around the first 60 days of lactation, where WOOD and QUADLOG shows an important dispersion in their estimation of the production values, making underestimates at the beginning of the period followed by overestimations. This behavior has already been observed by other researchers in incomplete gamma function (Grossman and Koops 1988). In the ALI equation, the inclusion of the estimate at 305 days and the d and e parameters in the multiple regression model improve the estimation since they have a better control in the early phase of the lactation curve (Ali and Schaeffer 1987), improving their prediction performance in the initial values of the curve.

Figure 3. Residuals graphic for actual and estimated milk production values


Conclusions


Acknowledgements

The authors want to acknowledge invaluable support for this research from the Instituto Nacional de Investigaciones Agrícolas (INIA, Venezuela), especially to Estación Experimental Local El Guayabo, and all their staff. We also want to thank Misses Angelica R and Andrea L for their help and support in data management.


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Received 21 July 2019; Accepted 6 September 2019; Published 2 October 2019

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